Bioinformática 2023/24
- Frequência: 31.05.2024, 14h00, salas 6.02 e outra(s) a determinar
- Basic concepts of algorithms
- Basic concepts of programming
- Case studies of the application of algorithms in Bioinformatics
- Practical Component (Programming in Python)
- Basic concepts
- Variables
- Decision and iteration
- Decomposition, Abstraction, and Functions
- Python and Rosalind
- Python and NumPy
- Python and Pandas
Bibliography
- Lecture notes “Introduction to Computer Science and Programming in Python”, Massachusetts Institute of Technology (MIT), Boston, 2021.
- Lecture notes “Biology Meets Programming: Bioinformatics for Beginners”, University of California (UC), San Diego, 2021.
- Bioinformatics with Python Cookbook, 2nd edition, Tiago Antão, Packt Publishing, 2018.
- Bioinformatics: An Introduction, 3th edition, Jeremy Ramsden, Springer-Verlag London, 2015.
Week |
Lecture Notes |
Labs |
01.03 |
Unit outline [PDF] |
|
12.04 |
Algorithms! Algorithms Everywhere... [PDF] |
|
19.04 |
Sequence Alignment [PDF] |
Python Loops [PDF] |