Uses of Class
hultig.align.SimpleChaining.Match

Packages that use SimpleChaining.Match

hultig.align

This package gathers the sequence alignment algorithms used in other classes, specially those in the hultig.sumo package.

Uses of SimpleChaining.Match in hultig.align

Methods in hultig.align that return types with arguments of type SimpleChaining.Match

Vector<SimpleChaining.Match>

SWaterman.getXBestMatches(List matches) Por JPC 20070317

Methods in hultig.align with parameters of type SimpleChaining.Match

boolean	SimpleChaining.Match.isChainable(SimpleChaining.Match m)
boolean	SimpleChaining.Match.notOverlap(SimpleChaining.Match m)